| 16. Round | 19/12/2024 | ACF Fiorentina [Youth] | - | Atalanta [Youth] | 0:0 |  |
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| 17. Round | 22/12/2024 | Atalanta [Youth] | - | Juventus [Youth] | 2:3 | ||||
| 18. Round | 04/01/2025 | Bologna FC [Youth] | - | Atalanta [Youth] | 1:2 | ||||
| 19. Round | 11/01/2025 | Atalanta [Youth] | - | AC Milan [Youth] | 1:1 | ||||
| 20. Round | 18/01/2025 | Torino FC [Youth] | - | Atalanta [Youth] | 0:0 | ||||
| 21. Round | 22/01/2025 | Atalanta [Youth] | - | Sassuolo Calcio [Youth] | 3:1 | ||||
| 22. Round | 26/01/2025 | Empoli FC [Youth] | - | Atalanta [Youth] | 0:1 | ||||
| 23. Round | 31/01/2025 | Cesena FC [Youth] | - | Atalanta [Youth] | 5:3 | ||||
| 24. Round | 08/02/2025 | Atalanta [Youth] | - | Udinese Calcio [Youth] | 1:0 | ||||
| 25. Round | 15/02/2025 | Lazio Roma [Youth] | - | Atalanta [Youth] | 1:0 | ||||
| 26. Round | 19/02/2025 | Atalanta [Youth] | - | ACF Fiorentina [Youth] | 1:2 | ||||
| 27. Round | 24/02/2025 | AC Milan [Youth] | - | Atalanta [Youth] | 2:1 | ||||
| 28. Round | 01/03/2025 | Atalanta [Youth] | - | Bologna FC [Youth] | 0:1 | ||||
| 29. Round | 09/03/2025 | Genoa CFC [Youth] | - | Atalanta [Youth] | 0:2 | ||||
| 37. Round | 11/05/2025 | Atalanta [Youth] | - | Cagliari Calcio [Youth] | 0:1 |
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