| Squad | Appearances | ||
| sorting |
| Name |  |
 |
 |
 |
 |
 |
 |
 |
 |
| Andres Oper | 900' | 10 | 10 | - | - | 3 | 2 | - | - |
| Martin Reim | 900' | 10 | 10 | - | - | 2 | - | - | - |
| Indrek Zelinski | 704' | 10 | 9 | 1 | 5 | 2 | 1 | - | - |
| Urmas Rooba | 712' | 9 | 8 | 1 | 1 | - | 2 | - | - |
| Andrei Stepanov | 810' | 9 | 9 | - | - | - | 2 | - | - |
| Teet Allas | 501' | 7 | 5 | 2 | - | - | 1 | - | - |
| Kert Haavistu | 303' | 7 | 4 | 3 | 4 | - | 1 | - | - |
| Marko Kristal | 598' | 7 | 7 | - | 1 | 1 | 1 | - | - |
| Raio Piiroja | 613' | 7 | 7 | - | 1 | 1 | - | - | - |
| Kristen Viikmäe | 355' | 7 | 5 | 2 | 5 | - | 1 | - | - |
| Aivar Anniste | 267' | 6 | 1 | 5 | - | - | - | - | - |
| Martin Kaalma | 540' | 6 | 6 | - | - | - | - | - | - |
| Jevgeni Novikov | 497' | 6 | 6 | - | 3 | 1 | 1 | - | - |
| Erko Saviauk | 510' | 6 | 6 | - | 1 | - | - | - | - |
| Sergei Terehhov | 428' | 6 | 4 | 2 | - | - | - | - | - |
| Marek Lemsalu | 437' | 5 | 5 | - | 1 | - | - | - | - |
| Viktor Alonen | 123' | 4 | 2 | 2 | 2 | - | - | - | - |
| Dmitri Ustritski | 88' | 4 | - | 4 | - | - | - | - | - |
| Mart Poom | 270' | 3 | 3 | - | - | - | - | - | - |
| Janno Jürisson | 88' | 2 | 1 | 1 | 1 | - | - | - | - |
| Taavi Rähn | 61' | 1 | - | 1 | - | - | - | - | - |
| Meelis Rooba | 90' | 1 | 1 | - | - | - | - | - | - |
| Mark Švets | 17' | 1 | - | 1 | - | - | - | - | - |
| Toomas Tohver | 90' | 1 | 1 | - | - | - | - | - | - |
UEFA