| 2. Round | 17/08/2016 | Arminia Bielefeld [Youth] | - | Fortuna Düsseldorf [Youth] | 0:1 | ||||
| 3. Round | 21/08/2016 | Fortuna Düsseldorf [Youth] | - | FC Schalke 04 [Youth] | 0:3 |  |
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| 7. Round | 24/09/2016 | Fortuna Düsseldorf [Youth] | - | Bayer Leverkusen [Youth] | 0:3 | ||||
| 11. Round | 05/11/2016 | VfL Bochum [Youth] | - | Fortuna Düsseldorf [Youth] | 3:2 | ||||
| 12. Round | 19/11/2016 | Fortuna Düsseldorf [Youth] | - | Preußen Münster [Youth] | 5:0 |
Bosnia-Herzegovina