| 1. Round | 06/08/2006 | FC Schönberg 95 | - | BFC Dynamo | 4:2 |  |
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| 2. Round | 11/08/2006 | BFC Dynamo | - | TSG Neustrelitz | 0:0 | ||||
| 3. Round | 18/08/2006 | BAK Ankaraspor 07 | - | BFC Dynamo | 3:1 | |
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| 6. Round | 24/09/2006 | BFC Dynamo | - | Torgelower SV Greif | 0:0 | ||||
| 7. Round | 30/09/2006 | MSV 1919 Neuruppin | - | BFC Dynamo | 0:0 | ||||
| 8. Round | 14/10/2006 | BFC Dynamo | - | Hansa Rostock II | 0:5 | ||||
| 9. Round | 22/10/2006 | Türkiyemspor Berlin | - | BFC Dynamo | 1:0 | ||||
| 10. Round | 28/10/2006 | BFC Dynamo | - | SV Yesilyurt | 1:1 | ||||
| 11. Round | 04/11/2006 | BFC Preussen | - | BFC Dynamo | 1:1 | ||||
| 12. Round | 11/11/2006 | BFC Dynamo | - | Germania Schöneiche | 1:1 | ||||
| 13. Round | 18/11/2006 | BFC Dynamo | - | Ludwigsfelder FC | 2:3 | ||||
| 14. Round | 25/11/2006 | FV Motor Eberswalde | - | BFC Dynamo | 1:0 |
Germany