| 14. Round | 30/09/2012 | Bayern München II | - | FC Ismaning | 2:0 | ||||
| 15. Round | 03/10/2012 | FV Illertissen | - | FC Ismaning | 1:1 | ||||
| 16. Round | 06/10/2012 | FC Ismaning | - | SpVgg Greuther Fürth II | 1:3 |  |
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| 18. Round | 20/10/2012 | FC Ismaning | - | TSV 1896 Rain | 5:1 | |
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| 20. Round | 03/11/2012 | Würzburger Kickers | - | FC Ismaning | 0:5 | ||||
| 21. Round | 10/11/2012 | FC Ismaning | - | FC Augsburg II | 1:2 | ||||
| 19. Round | 13/11/2012 | SV Seligenporten | - | FC Ismaning | 0:2 | ||||
| 22. Round | 17/11/2012 | SpVgg Bayern Hof | - | FC Ismaning | 2:1 |
Germany