| 8. Round | 22/09/2023 | Bor. Mönchengladbach II | - | SC Paderborn 07 II | 2:1 | ||||
| 9. Round | 02/10/2023 | SC Paderborn 07 II | - | FC Schalke 04 II | 2:2 | ||||
| 10. Round | 07/10/2023 | SV Rödinghausen | - | SC Paderborn 07 II | 2:0 | ||||
| 12. Round | 20/10/2023 | FC Wegberg-Beeck | - | SC Paderborn 07 II | 3:2 | ||||
| 11. Round | 25/10/2023 | SC Paderborn 07 II | - | 1. FC Köln II | 3:1 | ||||
| 13. Round | 28/10/2023 | Alemannia Aachen | - | SC Paderborn 07 II | 2:1 | ||||
| 14. Round | 04/11/2023 | SC Paderborn 07 II | - | SC Wiedenbrück | 2:2 |  |
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| 15. Round | 10/11/2023 | SSVg Velbert | - | SC Paderborn 07 II | 2:2 | ||||
| 16. Round | 20/11/2023 | SC Paderborn 07 II | - | SV Lippstadt 08 | 1:1 | ||||
| 17. Round | 25/11/2023 | Rot-Weiß Oberhausen | - | SC Paderborn 07 II | 4:1 | ||||
| 22. Round | 17/02/2024 | 1. FC Bocholt | - | SC Paderborn 07 II | 0:1 | ||||
| 30. Round | 20/04/2024 | SC Paderborn 07 II | - | Alemannia Aachen | 0:1 |  |
Germany