| 29. Round | 23/03/2013 | Würzburger Kickers | - | TSV 1860 München II | 0:2 |  |
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| 30. Round | 28/03/2013 | SC Eltersdorf | - | Würzburger Kickers | 1:3 |  |
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| 25. Round | 02/04/2013 | FV Illertissen | - | Würzburger Kickers | 3:2 | ||||
| 31. Round | 06/04/2013 | Würzburger Kickers | - | FC Memmingen | 3:1 | ||||
| 15. Round | 10/04/2013 | Würzburger Kickers | - | 1. FC Nürnberg II | 1:1 | ||||
| 32. Round | 13/04/2013 | FC Ingolstadt 04 II | - | Würzburger Kickers | 2:2 | ||||
| 28. Round | 16/04/2013 | SV Heimstetten | - | Würzburger Kickers | 1:0 | |
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| 33. Round | 20/04/2013 | Würzburger Kickers | - | TSV 1860 Rosenheim | 1:1 | ||||
| 34. Round | 27/04/2013 | 1. FC Nürnberg II | - | Würzburger Kickers | 6:0 | ||||
| 26. Round | 30/04/2013 | FC Augsburg II | - | Würzburger Kickers | 0:1 | ||||
| 35. Round | 04/05/2013 | Würzburger Kickers | - | TSV Buchbach | 4:0 | ||||
| 36. Round | 11/05/2013 | VfL Frohnlach | - | Würzburger Kickers | 2:4 | ||||
| 38. Round | 24/05/2013 | Bayern München II | - | Würzburger Kickers | 6:1 |
Germany
England