| 1. Round | 15/07/2011 | FSV Frankfurt | - | 1. FC Union Berlin | 1:1 | ||||
| 3. Round | 05/08/2011 | 1. FC Union Berlin | - | SC Paderborn 07 | 3:0 | ||||
| 4. Round | 12/08/2011 | Dynamo Dresden | - | 1. FC Union Berlin | 4:0 |  |
|||
| 9. Round | 24/09/2011 | 1. FC Union Berlin | - | Alemannia Aachen | 2:0 | ||||
| 21. Round | 11/02/2012 | 1. FC Union Berlin | - | Dynamo Dresden | 4:0 | ||||
| 22. Round | 18/02/2012 | VfL Bochum | - | 1. FC Union Berlin | 4:2 | ||||
| 28. Round | 01/04/2012 | Karlsruher SC | - | 1. FC Union Berlin | 2:0 | ||||
| 29. Round | 05/04/2012 | 1. FC Union Berlin | - | Erzgebirge Aue | 1:0 | ||||
| 30. Round | 10/04/2012 | FC St. Pauli | - | 1. FC Union Berlin | 2:1 | ||||
| 31. Round | 13/04/2012 | 1. FC Union Berlin | - | Eintracht Braunschweig | 1:0 | ||||
| 32. Round | 22/04/2012 | Fortuna Düsseldorf | - | 1. FC Union Berlin | 2:1 | |
|||
| 33. Round | 29/04/2012 | 1. FC Union Berlin | - | Hansa Rostock | 5:4 |  |
|||
| 34. Round | 06/05/2012 | Energie Cottbus | - | 1. FC Union Berlin | 2:1 |
Germany