| 1. Round | 20/08/2006 | SG Wattenscheid 09 [Youth] | - | FC Schalke 04 [Youth] | 0:2 | ||||
| 2. Round | 27/08/2006 | FC Schalke 04 [Youth] | - | Arminia Bielefeld [Youth] | 1:0 | ||||
| 3. Round | 03/09/2006 | MSV Duisburg [Youth] | - | FC Schalke 04 [Youth] | 0:3 | ||||
| 5. Round | 17/09/2006 | SpVgg Erkenschwick [Youth] | - | FC Schalke 04 [Youth] | 0:2 | ||||
| 6. Round | 24/09/2006 | FC Schalke 04 [Youth] | - | Borussia Dortmund [Youth] | 3:3 | ||||
| 7. Round | 29/09/2006 | Rot Weiss Ahlen [Youth] | - | FC Schalke 04 [Youth] | 1:1 | ||||
| 8. Round | 15/10/2006 | FC Schalke 04 [Youth] | - | Bayer Leverkusen [Youth] | 2:1 | ||||
| 9. Round | 29/10/2006 | Bor. Mönchengladbach [Youth] | - | FC Schalke 04 [Youth] | 2:0 |  |
|||
| 10. Round | 05/11/2006 | FC Schalke 04 [Youth] | - | Rot-Weiss Essen [Youth] | 1:2 | ||||
| 11. Round | 12/11/2006 | Bonner SC [Youth] | - | FC Schalke 04 [Youth] | 0:3 | ||||
| 13. Round | 03/12/2006 | Alemannia Aachen [Youth] | - | FC Schalke 04 [Youth] | 1:5 |
Germany