| 1. Round | 30/07/2016 | SV Wehen Wiesbaden | - | VfR Aalen | 1:2 | ||||
| 2. Round | 06/08/2016 | Sportfreunde Lotte | - | SV Wehen Wiesbaden | 0:0 |  |
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| 3. Round | 09/08/2016 | SV Wehen Wiesbaden | - | Fortuna Köln | 3:0 | ||||
| 4. Round | 13/08/2016 | FSV Zwickau | - | SV Wehen Wiesbaden | 0:3 | ||||
| 5. Round | 27/08/2016 | SV Wehen Wiesbaden | - | SC Paderborn 07 | 1:2 | ||||
| 6. Round | 09/09/2016 | VfL Osnabrück | - | SV Wehen Wiesbaden | 1:0 | ||||
| 14. Round | 05/11/2016 | SV Wehen Wiesbaden | - | Chemnitzer FC | 0:3 | ||||
| 18. Round | 10/12/2016 | SV Wehen Wiesbaden | - | Hallescher FC | 1:1 | ||||
| 19. Round | 17/12/2016 | FSV Frankfurt | - | SV Wehen Wiesbaden | 3:1 | ||||
| 20. Round | 28/01/2017 | VfR Aalen | - | SV Wehen Wiesbaden | 1:1 | ||||
| 21. Round | 04/02/2017 | SV Wehen Wiesbaden | - | Sportfreunde Lotte | 0:3 | ||||
| 37. Round | 13/05/2017 | Hallescher FC | - | SV Wehen Wiesbaden | 0:3 | ||||
| 38. Round | 20/05/2017 | SV Wehen Wiesbaden | - | FSV Frankfurt | 4:1 |
Germany