| 4. Round | 27/08/2023 | FC Carl Zeiss Jena [Youth] | - | VfL Osnabrück [Youth] | 4:3 | ||||
| 8. Round | 21/10/2023 | FC Carl Zeiss Jena [Youth] | - | Hertha BSC [Youth] | 1:1 | ||||
| 9. Round | 28/10/2023 | Eintracht Braunschweig [Youth] | - | FC Carl Zeiss Jena [Youth] | 3:1 | ||||
| 11. Round | 18/11/2023 | FC St. Pauli [Youth] | - | FC Carl Zeiss Jena [Youth] | 2:0 | ||||
| 12. Round | 25/11/2023 | FC Carl Zeiss Jena [Youth] | - | Werder Bremen [Youth] | 5:0 |  |
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| 14. Round | 09/12/2023 | FC Carl Zeiss Jena [Youth] | - | VfL Wolfsburg [Youth] | 0:2 | ||||
| 13. Round | 27/01/2024 | 1. FC Union Berlin [Youth] | - | FC Carl Zeiss Jena [Youth] | 4:2 | ||||
| 16. Round | 10/02/2024 | FC Carl Zeiss Jena [Youth] | - | Hamburger SV [Youth] | 0:1 | ||||
| 17. Round | 17/02/2024 | VfL Osnabrück [Youth] | - | FC Carl Zeiss Jena [Youth] | 6:4 | ||||
| 18. Round | 24/02/2024 | FC Carl Zeiss Jena [Youth] | - | Dynamo Dresden [Youth] | 3:1 |
Germany