| 1. Round | 16/07/2016 | Würzburger Kickers II | - | DJK Bamberg | 0:0 | ||||
| 2. Round | 20/07/2016 | 1. FC Sand | - | Würzburger Kickers II | 2:0 dec. |  |
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| 6. Round | 06/08/2016 | VfB Eichstätt | - | Würzburger Kickers II | 3:1 |  |
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| 7. Round | 13/08/2016 | Würzburger Kickers II | - | 1. SC Feucht | 0:0 | ||||
| 8. Round | 19/08/2016 | Viktoria Aschaffenburg | - | Würzburger Kickers II | 2:1 | ||||
| 9. Round | 27/08/2016 | Würzburger Kickers II | - | SpVgg Ansbach | 2:1 | ||||
| 11. Round | 10/09/2016 | SV Erlenbach | - | Würzburger Kickers II | 1:1 | ||||
| 13. Round | 25/09/2016 | DJK Ammerthal | - | Würzburger Kickers II | 1:1 | ||||
| 15. Round | 08/10/2016 | Würzburger FV | - | Würzburger Kickers II | 2:1 | |
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| 22. Round | 27/11/2016 | Alemannia Haibach | - | Würzburger Kickers II | 1:1 |
Germany