| 11. Round | 28/10/2006 | Bahlinger SC | - | SC Freiburg II | 3:1 | ||||
| 12. Round | 01/11/2006 | SC Freiburg II | - | 1. FC Pforzheim | 4:0 | ||||
| 13. Round | 05/11/2006 | TSG Hoffenheim II | - | SC Freiburg II | 1:0 |  |
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| 14. Round | 11/11/2006 | SC Freiburg II | - | VfR Mannheim | 0:2 | ||||
| 16. Round | 25/11/2006 | SC Freiburg II | - | Normannia Gmünd | 1:1 | ||||
| 17. Round | 02/12/2006 | SGV Freiberg | - | SC Freiburg II | 5:2 | ||||
| 19. Round | 24/02/2007 | SC Freiburg II | - | FC Emmendingen | 2:0 | ||||
| 21. Round | 10/03/2007 | SC Freiburg II | - | FC Nöttingen | 1:1 | ||||
| 23. Round | 24/03/2007 | SC Freiburg II | - | Waldhof Mannheim | 1:1 | ||||
| 24. Round | 31/03/2007 | SC Freiburg II | - | SV Sandhausen | 1:2 | |
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| 25. Round | 05/04/2007 | FC 08 Villingen | - | SC Freiburg II | 3:1 |  |
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| 26. Round | 09/04/2007 | SC Freiburg II | - | SV Bonlanden | 0:0 | ||||
| 27. Round | 14/04/2007 | Stuttgarter Kickers II | - | SC Freiburg II | 2:3 | |
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| 28. Round | 21/04/2007 | SC Freiburg II | - | Bahlinger SC | 3:1 | ||||
| 30. Round | 05/05/2007 | SC Freiburg II | - | TSG Hoffenheim II | 2:2 | ||||
| 31. Round | 12/05/2007 | VfR Mannheim | - | SC Freiburg II | 0:0 | ||||
| 32. Round | 19/05/2007 | SC Freiburg II | - | Heidenheimer SB 1846 | 3:1 | |
Germany