| 1. Round | 13/08/2016 | Hamburger SV [Youth B] | - | TeBe Berlin [Youth B] | 5:0 |  |
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| 2. Round | 20/08/2016 | Hertha BSC [Youth B] | - | Hamburger SV [Youth B] | 1:4 | |
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| 3. Round | 28/08/2016 | Hamburger SV [Youth B] | - | 1. FC Magdeburg [Youth B] | 4:0 | |
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| 5. Round | 18/09/2016 | Hamburger SV [Youth B] | - | RB Leipzig [Youth B] | 0:1 | ||||
| 6. Round | 24/09/2016 | Dynamo Dresden [Youth B] | - | Hamburger SV [Youth B] | 2:3 | ||||
| 7. Round | 08/10/2016 | Hamburger SV [Youth B] | - | FC St. Pauli [Youth B] | 2:2 |  |
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| 4. Round | 11/10/2016 | Hamburger SV [Youth B] | - | Werder Bremen [Youth B] | 1:4 | ||||
| 9. Round | 23/10/2016 | Hamburger SV [Youth B] | - | VfL Wolfsburg [Youth B] | 2:2 | ||||
| 21. Round | 18/03/2017 | Hamburger SV [Youth B] | - | Niendorfer TSV [Youth B] | 5:0 | |
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| 22. Round | 02/04/2017 | VfL Wolfsburg [Youth B] | - | Hamburger SV [Youth B] | 2:0 | ||||
| 23. Round | 09/04/2017 | Hamburger SV [Youth B] | - | 1. FC Union Berlin [Youth B] | 1:2 | |
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| 25. Round | 21/05/2017 | Hansa Rostock [Youth B] | - | Hamburger SV [Youth B] | 0:1 | ||||
| 26. Round | 28/05/2017 | Hamburger SV [Youth B] | - | Eintracht Braunschweig [Youth B] | 3:1 | |
Germany