| 19. Round | 28/01/2024 | Greifswalder FC | - | FC Carl Zeiss Jena | 3:0 | ||||
| 20. Round | 03/02/2024 | FC Carl Zeiss Jena | - | SV Babelsberg 03 | 1:1 | ||||
| 22. Round | 17/02/2024 | FC Carl Zeiss Jena | - | BFC Dynamo | 2:3 |  |
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| 23. Round | 24/02/2024 | FSV 63 Luckenwalde | - | FC Carl Zeiss Jena | 0:3 | ||||
| 24. Round | 02/03/2024 | FC Carl Zeiss Jena | - | Hertha BSC II | 3:1 | ||||
| 21. Round | 26/03/2024 | 1. FC Lok Leipzig | - | FC Carl Zeiss Jena | 2:0 | ||||
| 28. Round | 05/04/2024 | FC Carl Zeiss Jena | - | Energie Cottbus | 1:1 | ||||
| 30. Round | 21/04/2024 | FC Carl Zeiss Jena | - | Berliner AK 07 | 3:3 | ||||
| 31. Round | 28/04/2024 | FSV Zwickau | - | FC Carl Zeiss Jena | 1:2 | ||||
| 32. Round | 04/05/2024 | FC Carl Zeiss Jena | - | VSG Altglienicke | 2:2 | ||||
| 34. Round | 19/05/2024 | FC Carl Zeiss Jena | - | FC Eilenburg | 2:0 |
Germany