| 9. Round | 28/10/2006 | SG Sachsen Leipzig [Youth] | - | Hansa Rostock [Youth] | 2:2 | ||||
| 11. Round | 12/11/2006 | Rot-Weiß Erfurt [Youth] | - | Hansa Rostock [Youth] | 3:1 | ||||
| 14. Round | 17/02/2007 | Hansa Rostock [Youth] | - | SC Vier- u. Marschlande [Youth] | 4:1 | ||||
| 15. Round | 24/02/2007 | Werder Bremen [Youth] | - | Hansa Rostock [Youth] | 3:1 |  |
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| 17. Round | 17/03/2007 | TeBe Berlin [Youth] | - | Hansa Rostock [Youth] | 0:4 |  |
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| 18. Round | 25/03/2007 | Hansa Rostock [Youth] | - | Chemnitzer FC [Youth] | 2:0 | ||||
| 19. Round | 31/03/2007 | Energie Cottbus [Youth] | - | Hansa Rostock [Youth] | 0:2 | ||||
| 22. Round | 28/04/2007 | Hansa Rostock [Youth] | - | SG Sachsen Leipzig [Youth] | 5:2 | ||||
| 23. Round | 01/05/2007 | Hamburger SV [Youth] | - | Hansa Rostock [Youth] | 2:2 | ||||
| 24. Round | 20/05/2007 | Hansa Rostock [Youth] | - | Rot-Weiß Erfurt [Youth] | 2:3 | ||||
| 26. Round | 10/06/2007 | Holstein Kiel [Youth] | - | Hansa Rostock [Youth] | 2:3 | ||||
| 25. Round | 12/06/2007 | Hansa Rostock [Youth] | - | Tasmania Gropiusstadt [Youth] | 3:2 |
Germany