| 1. Round | 13/08/2017 | Hannover 96 [Youth B] | - | FC St. Pauli [Youth B] | 1:2 | ||||
| 2. Round | 16/08/2017 | FC St. Pauli [Youth B] | - | VfL Wolfsburg [Youth B] | 0:2 | ||||
| 3. Round | 19/08/2017 | Hertha BSC [Youth B] | - | FC St. Pauli [Youth B] | 5:1 |  |
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| 5. Round | 10/09/2017 | Eimsbütteler TV [Youth B] | - | FC St. Pauli [Youth B] | 0:4 | ||||
| 6. Round | 16/09/2017 | FC St. Pauli [Youth B] | - | Werder Bremen [Youth B] | 0:5 | ||||
| 16. Round | 30/09/2017 | FC St. Pauli [Youth B] | - | Hertha BSC [Youth B] | 0:5 | ||||
| 8. Round | 15/10/2017 | FC St. Pauli [Youth B] | - | 1. FC Union Berlin [Youth B] | 3:1 | ||||
| 9. Round | 22/10/2017 | RB Leipzig [Youth B] | - | FC St. Pauli [Youth B] | 3:1 | ||||
| 10. Round | 29/10/2017 | FC St. Pauli [Youth B] | - | Holstein Kiel [Youth B] | 3:2 | ||||
| 11. Round | 04/11/2017 | FC St. Pauli [Youth B] | - | 1. FC Magdeburg [Youth B] | 5:0 |
Germany