| 18. Round | 28/01/2017 | Erzgebirge Aue | - | 1. FC Heidenheim 1846 | 2:1 | ||||
| 20. Round | 11/02/2017 | Würzburger Kickers | - | 1. FC Heidenheim 1846 | 0:2 | ||||
| 21. Round | 17/02/2017 | 1. FC Heidenheim 1846 | - | VfB Stuttgart | 1:2 |  |
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| 22. Round | 25/02/2017 | Fortuna Düsseldorf | - | 1. FC Heidenheim 1846 | 0:0 | ||||
| 24. Round | 12/03/2017 | 1. FC Kaiserslautern | - | 1. FC Heidenheim 1846 | 1:1 | ||||
| 25. Round | 17/03/2017 | Eintracht Braunschweig | - | 1. FC Heidenheim 1846 | 3:2 | ||||
| 27. Round | 05/04/2017 | Dynamo Dresden | - | 1. FC Heidenheim 1846 | 2:1 | ||||
| 28. Round | 08/04/2017 | 1. FC Heidenheim 1846 | - | VfL Bochum | 0:0 | ||||
| 29. Round | 16/04/2017 | Karlsruher SC | - | 1. FC Heidenheim 1846 | 0:1 | ||||
| 30. Round | 22/04/2017 | 1. FC Heidenheim 1846 | - | Arminia Bielefeld | 2:2 | ||||
| 31. Round | 28/04/2017 | FC St. Pauli | - | 1. FC Heidenheim 1846 | 3:0 | ||||
| 32. Round | 05/05/2017 | 1. FC Heidenheim 1846 | - | Hannover 96 | 0:2 | ||||
| 33. Round | 14/05/2017 | 1. FC Union Berlin | - | 1. FC Heidenheim 1846 | 0:1 | ||||
| 34. Round | 21/05/2017 | 1. FC Heidenheim 1846 | - | TSV 1860 München | 2:1 |
Germany