| 2. Round | 05/09/1948 | TuS Bremerhaven 93 | - | FC St. Pauli | 3:0 | ||||
| 2. Round | 12/09/1948 | FC St. Pauli | - | Eimsbütteler TV | 5:1 | ||||
| 2. Round | 19/09/1948 | VfL Osnabrück | - | FC St. Pauli | 0:1 |  |
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| 3. Round | 03/10/1948 | FC St. Pauli | - | Concordia Hamburg | 2:0 | |
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| 3. Round | 10/10/1948 | FC St. Pauli | - | Bremer SV | 4:1 | ||||
| 3. Round | 24/10/1948 | VfB Lübeck | - | FC St. Pauli | 1:0 | ||||
| 5. Round | 12/12/1948 | FC St. Pauli | - | Arminia Hannover | 1:2 |
Germany