| 2. Round | 06/09/2003 | SC Paderborn 07 [Youth] | - | Viktoria Köln [Youth] | 5:2 | ||||
| 3. Round | 14/09/2003 | Rot-Weiss Essen [Youth] | - | SC Paderborn 07 [Youth] | 4:1 | ||||
| 5. Round | 28/09/2003 | VfL Bochum [Youth] | - | SC Paderborn 07 [Youth] | 2:0 | ||||
| 8. Round | 08/11/2003 | SC Paderborn 07 [Youth] | - | 1. FC Köln [Youth] | 0:3 | ||||
| 9. Round | 15/11/2003 | Fortuna Düsseldorf [Youth] | - | SC Paderborn 07 [Youth] | 5:0 | ||||
| 10. Round | 22/11/2003 | SC Paderborn 07 [Youth] | - | Bor. Mönchengladbach [Youth] | 0:3 |  |
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| 11. Round | 30/11/2003 | SG Wattenscheid 09 [Youth] | - | SC Paderborn 07 [Youth] | 4:2 |
Germany