| 9. Round | 29/10/2023 | 1. FC Union Berlin [Youth] | - | FC St. Pauli [Youth] | 3:1 | ||||
| 10. Round | 04/11/2023 | Werder Bremen [Youth] | - | FC St. Pauli [Youth] | 2:1 | ||||
| 12. Round | 25/11/2023 | VfL Wolfsburg [Youth] | - | FC St. Pauli [Youth] | 2:2 | ||||
| 14. Round | 09/12/2023 | FC St. Pauli [Youth] | - | RB Leipzig [Youth] | 1:0 |  |
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| 13. Round | 27/01/2024 | FC St. Pauli [Youth] | - | Hamburger SV [Youth] | 2:0 | ||||
| 22. Round | 13/04/2024 | FC St. Pauli [Youth] | - | 1. FC Union Berlin [Youth] | 0:1 | ||||
| 24. Round | 27/04/2024 | FC Carl Zeiss Jena [Youth] | - | FC St. Pauli [Youth] | 3:6 | ||||
| 25. Round | 04/05/2024 | FC St. Pauli [Youth] | - | VfL Wolfsburg [Youth] | 0:5 |
Germany