22. Round | 14/02/2009 | FC Carl Zeiss Jena | - | Rot-Weiß Erfurt | 1:1 | ||||
23. Round | 21/02/2009 | Kickers Emden | - | FC Carl Zeiss Jena | 3:1 | ||||
24. Round | 01/03/2009 | FC Carl Zeiss Jena | - | Bayern München II | 0:2 | ||||
21. Round | 04/03/2009 | Erzgebirge Aue | - | FC Carl Zeiss Jena | 5:0 | ||||
25. Round | 08/03/2009 | VfB Stuttgart II | - | FC Carl Zeiss Jena | 3:0 | ||||
26. Round | 15/03/2009 | FC Carl Zeiss Jena | - | Kickers Offenbach | 0:2 | ||||
27. Round | 21/03/2009 | 1. FC Union Berlin | - | FC Carl Zeiss Jena | 1:0 | ||||
28. Round | 28/03/2009 | FC Carl Zeiss Jena | - | Wuppertaler SV | 0:0 | ||||
30. Round | 07/04/2009 | FC Carl Zeiss Jena | - | Eintracht Braunschweig | 2:0 | ||||
32. Round | 18/04/2009 | VfR Aalen | - | FC Carl Zeiss Jena | 3:2 | ||||
33. Round | 25/04/2009 | FC Carl Zeiss Jena | - | Werder Bremen II | 3:1 | ||||
34. Round | 02/05/2009 | SC Paderborn 07 | - | FC Carl Zeiss Jena | 2:0 | ||||
35. Round | 05/05/2009 | FC Carl Zeiss Jena | - | Stuttgarter Kickers | 0:0 |