| 1. Round | 31/07/2016 | TSV Lägerdorf | - | TSB Flensburg | 0:2 | ||||
| 2. Round | 03/08/2016 | TSB Flensburg | - | Kilia Kiel | 3:0 | ||||
| 3. Round | 06/08/2016 | Heider SV | - | TSB Flensburg | 5:1 | ||||
| 4. Round | 10/08/2016 | TSV Schilksee | - | TSB Flensburg | 1:1 | ||||
| 5. Round | 13/08/2016 | TSB Flensburg | - | TuS Hartenholm | 4:4 | ||||
| 6. Round | 19/08/2016 | TSV Kropp | - | TSB Flensburg | 0:0 | ||||
| 7. Round | 27/08/2016 | TSB Flensburg | - | TSV Altenholz | 3:0 | ||||
| 9. Round | 10/09/2016 | TSB Flensburg | - | PSV Union Neumünster | 3:0 | ||||
| 11. Round | 24/09/2016 | TSB Flensburg | - | SV Frisia 03 | 3:0 | ||||
| 13. Round | 08/10/2016 | TSB Flensburg | - | SV Todesfelde | 2:2 | ||||
| 19. Round | 18/02/2017 | TuS Hartenholm | - | TSB Flensburg | 1:5 | ||||
| 23. Round | 04/03/2017 | TSV Altenholz | - | TSB Flensburg | 2:5 | ||||
| 24. Round | 15/04/2017 | TSB Flensburg | - | NTSV Strand 08 | 1:2 | ||||
| 22. Round | 17/04/2017 | TSB Flensburg | - | TSV Lägerdorf | 4:3 | ||||
| 29. Round | 23/04/2017 | SV Todesfelde | - | TSB Flensburg | 0:1 | ||||
| 34. Round | 26/04/2017 | TSB Flensburg | - | TSV Schilksee | 3:1 |  |
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| 21. Round | 09/05/2017 | Kilia Kiel | - | TSB Flensburg | 1:0 | ||||
| 33. Round | 20/05/2017 | VfR Neumünster | - | TSB Flensburg | 1:3 |
Germany