| 6. Round | 21/08/2016 | Flensburg 08 | - | Oldenburger SV | 0:0 | ||||
| 7. Round | 28/08/2016 | SV Eutin 08 | - | Flensburg 08 | 4:2 | ||||
| 13. Round | 09/10/2016 | TuS Hartenholm | - | Flensburg 08 | 1:4 | ||||
| 14. Round | 15/10/2016 | Flensburg 08 | - | TSV Kropp | 6:1 | ||||
| 15. Round | 22/10/2016 | TSV Altenholz | - | Flensburg 08 | 0:6 | ||||
| 16. Round | 29/10/2016 | Flensburg 08 | - | NTSV Strand 08 | 2:0 | ||||
| 17. Round | 05/11/2016 | PSV Union Neumünster | - | Flensburg 08 | 1:4 | ||||
| 19. Round | 19/11/2016 | Flensburg 08 | - | Concordia Schönkirchen | 5:0 |
Germany