| 3. Round | 26/08/2016 | Hansa Rostock [Youth B] | - | Hertha BSC [Youth B] | 1:3 | ||||
| 4. Round | 03/09/2016 | Hertha BSC [Youth B] | - | Eintracht Braunschweig [Youth B] | 0:4 | ||||
| 5. Round | 17/09/2016 | TeBe Berlin [Youth B] | - | Hertha BSC [Youth B] | 0:1 | ||||
| 6. Round | 24/09/2016 | Hertha BSC [Youth B] | - | Holstein Kiel [Youth B] | 2:1 | ||||
| 7. Round | 08/10/2016 | Hertha BSC [Youth B] | - | 1. FC Magdeburg [Youth B] | 2:1 | ||||
| 8. Round | 15/10/2016 | Werder Bremen [Youth B] | - | Hertha BSC [Youth B] | 2:1 |  |
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| 9. Round | 22/10/2016 | Hertha BSC [Youth B] | - | RB Leipzig [Youth B] | 1:2 | ||||
| 10. Round | 29/10/2016 | Dynamo Dresden [Youth B] | - | Hertha BSC [Youth B] | 1:3 | ||||
| 12. Round | 12/11/2016 | Niendorfer TSV [Youth B] | - | Hertha BSC [Youth B] | 0:4 | ||||
| 14. Round | 03/12/2016 | Hertha BSC [Youth B] | - | 1. FC Union Berlin [Youth B] | 0:0 | ||||
| 16. Round | 17/12/2016 | Hertha BSC [Youth B] | - | Hansa Rostock [Youth B] | 1:1 | |
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| 23. Round | 08/04/2017 | Hertha BSC [Youth B] | - | Dynamo Dresden [Youth B] | 4:3 |
Germany