| 7. Round | 14/08/2012 | FC Ismaning | - | FC Memmingen | 0:0 | ||||
| 8. Round | 18/08/2012 | FC Ingolstadt 04 II | - | FC Ismaning | 2:2 | ||||
| 9. Round | 25/08/2012 | FC Ismaning | - | TSV 1860 Rosenheim | 3:0 | ||||
| 11. Round | 08/09/2012 | FC Ismaning | - | TSV Buchbach | 0:0 | ||||
| 16. Round | 06/10/2012 | FC Ismaning | - | SpVgg Greuther Fürth II | 1:3 | ||||
| 17. Round | 13/10/2012 | Viktoria Aschaffenburg | - | FC Ismaning | 1:1 | ||||
| 18. Round | 20/10/2012 | FC Ismaning | - | TSV 1896 Rain | 5:1 |  |
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| 20. Round | 03/11/2012 | Würzburger Kickers | - | FC Ismaning | 0:5 | ||||
| 21. Round | 10/11/2012 | FC Ismaning | - | FC Augsburg II | 1:2 | ||||
| 22. Round | 17/11/2012 | SpVgg Bayern Hof | - | FC Ismaning | 2:1 |  |
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| 29. Round | 23/03/2013 | FC Ismaning | - | 1. FC Nürnberg II | 0:2 | ||||
| 30. Round | 30/03/2013 | TSV Buchbach | - | FC Ismaning | 1:1 |  |
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| 23. Round | 03/04/2013 | FC Ismaning | - | SV Heimstetten | 0:0 | ||||
| 31. Round | 07/04/2013 | FC Ismaning | - | VfL Frohnlach | 1:2 | ||||
| 36. Round | 11/05/2013 | FC Ismaning | - | Viktoria Aschaffenburg | 0:2 | ||||
| 38. Round | 25/05/2013 | FC Ismaning | - | SV Seligenporten | 3:1 |
Brazil