| 13. Round | 28/01/2024 | Borussia Dortmund [Youth] | - | SC Paderborn 07 [Youth] | 3:1 | ||||
| 15. Round | 04/02/2024 | SC Paderborn 07 [Youth] | - | Fortuna Düsseldorf [Youth] | 3:3 |  |
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| 16. Round | 11/02/2024 | SC Paderborn 07 [Youth] | - | MSV Duisburg [Youth] | 1:0 | ||||
| 17. Round | 17/02/2024 | Alemannia Aachen [Youth] | - | SC Paderborn 07 [Youth] | 1:0 | ||||
| 18. Round | 25/02/2024 | SC Paderborn 07 [Youth] | - | FC Schalke 04 [Youth] | 1:1 | ||||
| 19. Round | 03/03/2024 | Bayer Leverkusen [Youth] | - | SC Paderborn 07 [Youth] | 4:1 | ||||
| 20. Round | 10/03/2024 | SC Paderborn 07 [Youth] | - | Bor. Mönchengladbach [Youth] | 3:1 | |
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| 21. Round | 07/04/2024 | Wuppertaler SV [Youth] | - | SC Paderborn 07 [Youth] | 3:8 | |
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| 23. Round | 21/04/2024 | Arminia Bielefeld [Youth] | - | SC Paderborn 07 [Youth] | 1:3 | |
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| 24. Round | 28/04/2024 | SC Paderborn 07 [Youth] | - | VfL Bochum [Youth] | 3:0 | ||||
| 25. Round | 05/05/2024 | 1. FC Köln [Youth] | - | SC Paderborn 07 [Youth] | 1:4 | ||||
| 26. Round | 11/05/2024 | SC Paderborn 07 [Youth] | - | Borussia Dortmund [Youth] | 2:1 | |
Germany