| 1. Round | 29/07/2006 | VfL Frohnlach | - | Wacker Burghausen II | 1:1 | ||||
| 2. Round | 02/08/2006 | Wacker Burghausen II | - | SC Fürstenfeldbruck | 1:1 |  |
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| 5. Round | 16/08/2006 | Wacker Burghausen II | - | SpVgg Bayern Hof | 1:1 | ||||
| 13. Round | 30/09/2006 | Wacker Burghausen II | - | 1. SC Feucht | 0:0 | ||||
| 15. Round | 14/10/2006 | Wacker Burghausen II | - | TSV Aindling | 1:1 | ||||
| 20. Round | 18/11/2006 | Wacker Burghausen II | - | VfL Frohnlach | 1:2 | ||||
| 26. Round | 10/03/2007 | SpVgg Greuther Fürth II | - | Wacker Burghausen II | 2:3 |
Germany