| 11. Round | 02/10/2009 | First Vienna FC | - | FC Wacker Innsbruck | 1:3 |  |
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| 15. Round | 03/11/2009 | FC Wacker Innsbruck | - | SCR Altach | 2:1 | ||||
| 18. Round | 27/11/2009 | FC Wacker Innsbruck | - | SKNV St. Pölten | 2:2 | ||||
| 20. Round | 13/03/2010 | FC Wacker Innsbruck | - | FC Lustenau | 1:2 | ||||
| 24. Round | 06/04/2010 | SCR Altach | - | FC Wacker Innsbruck | 3:0 | |
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| 25. Round | 09/04/2010 | FC Wacker Innsbruck | - | FC Lustenau | 1:0 | |
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| 26. Round | 17/04/2010 | FC Wacker Innsbruck | - | FC Trenkwalder Admira | 1:0 | ||||
| 27. Round | 23/04/2010 | Austria Wien (A) | - | FC Wacker Innsbruck | 2:1 | ||||
| 28. Round | 30/04/2010 | FC Wacker Innsbruck | - | SKNV St. Pölten | 2:1 |  |
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| 29. Round | 04/05/2010 | Austria Lustenau | - | FC Wacker Innsbruck | 2:2 | ||||
| 30. Round | 07/05/2010 | FC Wacker Innsbruck | - | FC Dornbirn | 2:0 | ||||
| 31. Round | 15/05/2010 | First Vienna FC | - | FC Wacker Innsbruck | 0:1 | ||||
| 32. Round | 21/05/2010 | FC Wacker Innsbruck | - | TSV Hartberg | 1:0 | |
Austria