| 1. Round | 29/07/2006 | FK Mladá Boleslav | - | Sigma Olomouc | 2:1 |  |
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| 4. Round | 19/08/2006 | Sigma Olomouc | - | Slovan Liberec | 0:1 | ||||
| 5. Round | 27/08/2006 | Slavia Praha | - | Sigma Olomouc | 3:0 | ||||
| 6. Round | 10/09/2006 | Viktoria Plzeň | - | Sigma Olomouc | 2:0 | |
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| 8. Round | 24/09/2006 | SK Kladno | - | Sigma Olomouc | 3:2 | |
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| 9. Round | 01/10/2006 | Sigma Olomouc | - | 1. FC Slovácko | 2:1 |
Czech Republic