| 3. Round | 29/07/2016 | SV Schalding-Heining | - | FV Illertissen | 0:0 | ||||
| 5. Round | 05/08/2016 | 1. FC Nürnberg II | - | FV Illertissen | 1:2 | ||||
| 6. Round | 12/08/2016 | FV Illertissen | - | SpVgg Bayern Hof | 3:0 | ||||
| 7. Round | 19/08/2016 | FV Illertissen | - | SV Seligenporten | 0:1 | ||||
| 11. Round | 17/09/2016 | FV Illertissen | - | FC Ingolstadt 04 II | 2:5 | ||||
| 12. Round | 24/09/2016 | SpVgg Bayreuth | - | FV Illertissen | 4:0 | ||||
| 13. Round | 01/10/2016 | FV Illertissen | - | TSV 1860 München II | 2:0 | ||||
| 15. Round | 15/10/2016 | FV Illertissen | - | VfR Garching | 1:2 | ||||
| 16. Round | 21/10/2016 | FC Memmingen | - | FV Illertissen | 1:2 |
Germany