| 7. Round | 29/08/2012 | Wacker Burghausen | - | Hansa Rostock | 2:0 | ||||
| 8. Round | 01/09/2012 | Kickers Offenbach | - | Wacker Burghausen | 1:0 |  |
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| 9. Round | 15/09/2012 | Wacker Burghausen | - | SV Wehen Wiesbaden | 0:0 | |
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| 10. Round | 22/09/2012 | Karlsruher SC | - | Wacker Burghausen | 1:2 | |
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| 11. Round | 26/09/2012 | Wacker Burghausen | - | 1. FC Heidenheim 1846 | 4:1 | |
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| 12. Round | 29/09/2012 | Rot-Weiß Erfurt | - | Wacker Burghausen | 0:3 | |
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| 16. Round | 02/11/2012 | SpVgg Unterhaching | - | Wacker Burghausen | 3:0 | |
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| 37. Round | 11/05/2013 | SV Babelsberg 03 | - | Wacker Burghausen | 0:4 |
Germany