| 2. Round | 11/08/2006 | BFC Dynamo | - | TSG Neustrelitz | 0:0 | ||||
| 3. Round | 18/08/2006 | BAK Ankaraspor 07 | - | BFC Dynamo | 3:1 | ||||
| 4. Round | 25/08/2006 | BFC Dynamo | - | LFC Berlin | 2:1 |  |
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| 5. Round | 20/09/2006 | TeBe Berlin | - | BFC Dynamo | 2:2 | ||||
| 6. Round | 24/09/2006 | BFC Dynamo | - | Torgelower SV Greif | 0:0 | ||||
| 8. Round | 14/10/2006 | BFC Dynamo | - | Hansa Rostock II | 0:5 | ||||
| 9. Round | 22/10/2006 | Türkiyemspor Berlin | - | BFC Dynamo | 1:0 | ||||
| 10. Round | 28/10/2006 | BFC Dynamo | - | SV Yesilyurt | 1:1 |  |
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| 11. Round | 04/11/2006 | BFC Preussen | - | BFC Dynamo | 1:1 | ||||
| 12. Round | 11/11/2006 | BFC Dynamo | - | Germania Schöneiche | 1:1 | ||||
| 13. Round | 18/11/2006 | BFC Dynamo | - | Ludwigsfelder FC | 2:3 | |
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| 14. Round | 25/11/2006 | FV Motor Eberswalde | - | BFC Dynamo | 1:0 | ||||
| 15. Round | 02/12/2006 | BFC Dynamo | - | SV Babelsberg 03 | 0:3 |
Germany