| 2. Round | 16/07/2013 | SV Schalding-Heining | - | SpVgg Bayern Hof | 2:2 | ||||
| 4. Round | 27/07/2013 | SpVgg Greuther Fürth II | - | SpVgg Bayern Hof | 2:0 | ||||
| 5. Round | 30/07/2013 | SpVgg Bayern Hof | - | FC Ingolstadt 04 II | 0:1 | ||||
| 6. Round | 02/08/2013 | TSV Buchbach | - | SpVgg Bayern Hof | 2:2 |  |
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| 15. Round | 20/09/2013 | FC Memmingen | - | SpVgg Bayern Hof | 2:0 | ||||
| 16. Round | 28/09/2013 | SpVgg Bayern Hof | - | FC Augsburg II | 0:2 | ||||
| 18. Round | 12/10/2013 | SpVgg Bayern Hof | - | SV Heimstetten | 2:1 | ||||
| 20. Round | 26/10/2013 | TSV 1860 München II | - | SpVgg Bayern Hof | 2:1 |
Czech Republic