| 1. Round | 14/07/2016 | SV Schalding-Heining | - | 1. FC Schweinfurt 05 | 1:1 | ||||
| 2. Round | 23/07/2016 | 1. FC Schweinfurt 05 | - | SpVgg Bayern Hof | 4:3 | ||||
| 3. Round | 29/07/2016 | 1. FC Schweinfurt 05 | - | 1. FC Nürnberg II | 1:2 | ||||
| 4. Round | 02/08/2016 | FV Illertissen | - | 1. FC Schweinfurt 05 | 3:0 | ||||
| 5. Round | 05/08/2016 | 1. FC Schweinfurt 05 | - | SV Seligenporten | 1:0 | ||||
| 8. Round | 27/08/2016 | SpVgg Unterhaching | - | 1. FC Schweinfurt 05 | 5:0 | ||||
| 9. Round | 02/09/2016 | 1. FC Schweinfurt 05 | - | FC Ingolstadt 04 II | 2:2 | ||||
| 10. Round | 10/09/2016 | SpVgg Bayreuth | - | 1. FC Schweinfurt 05 | 0:2 | ||||
| 11. Round | 17/09/2016 | 1. FC Schweinfurt 05 | - | TSV 1860 München II | 1:2 | ||||
| 16. Round | 21/10/2016 | Bayern München II | - | 1. FC Schweinfurt 05 | 2:1 | ||||
| 17. Round | 29/10/2016 | 1. FC Schweinfurt 05 | - | FC Augsburg II | 1:1 |
Dom. Republic