| 8. Round | 17/08/2012 | FC Memmingen | - | SpVgg Greuther Fürth II | 0:2 | ||||
| 9. Round | 25/08/2012 | Viktoria Aschaffenburg | - | FC Memmingen | 0:2 | ||||
| 10. Round | 31/08/2012 | FC Memmingen | - | TSV 1896 Rain | 2:0 | ||||
| 11. Round | 07/09/2012 | SV Seligenporten | - | FC Memmingen | 2:1 | ||||
| 12. Round | 14/09/2012 | FC Memmingen | - | Würzburger Kickers | 1:3 | ||||
| 13. Round | 21/09/2012 | FC Augsburg II | - | FC Memmingen | 1:1 | ||||
| 14. Round | 28/09/2012 | FC Memmingen | - | SpVgg Bayern Hof | 1:0 | ||||
| 15. Round | 02/10/2012 | SV Heimstetten | - | FC Memmingen | 1:0 | ||||
| 16. Round | 05/10/2012 | FC Memmingen | - | TSV 1860 München II | 1:1 | ||||
| 18. Round | 20/10/2012 | FV Illertissen | - | FC Memmingen | 1:0 | ||||
| 24. Round | 26/03/2013 | FC Memmingen | - | Eintracht Bamberg | 5:1 | ||||
| 25. Round | 17/04/2013 | Bayern München II | - | FC Memmingen | 1:2 | ||||
| 33. Round | 20/04/2013 | SpVgg Bayern Hof | - | FC Memmingen | 1:1 | ||||
| 26. Round | 23/04/2013 | FC Memmingen | - | FC Ismaning | 2:0 | ||||
| 38. Round | 24/05/2013 | FC Ingolstadt 04 II | - | FC Memmingen | 2:1 |
Germany