| 1. Round | 31/07/2016 | TSV Lägerdorf | - | TSB Flensburg | 0:2 | ||||
| 2. Round | 03/08/2016 | TSB Flensburg | - | Kilia Kiel | 3:0 | ||||
| 3. Round | 06/08/2016 | Heider SV | - | TSB Flensburg | 5:1 | ||||
| 4. Round | 10/08/2016 | TSV Schilksee | - | TSB Flensburg | 1:1 | ||||
| 6. Round | 19/08/2016 | TSV Kropp | - | TSB Flensburg | 0:0 | ||||
| 7. Round | 27/08/2016 | TSB Flensburg | - | TSV Altenholz | 3:0 | ||||
| 8. Round | 03/09/2016 | NTSV Strand 08 | - | TSB Flensburg | 0:3 | ||||
| 9. Round | 10/09/2016 | TSB Flensburg | - | PSV Union Neumünster | 3:0 | ||||
| 10. Round | 18/09/2016 | Holstein Kiel II | - | TSB Flensburg | 3:0 | ||||
| 11. Round | 24/09/2016 | TSB Flensburg | - | SV Frisia 03 | 3:0 |  |
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| 12. Round | 01/10/2016 | Flensburg 08 | - | TSB Flensburg | 1:1 | ||||
| 13. Round | 08/10/2016 | TSB Flensburg | - | SV Todesfelde | 2:2 | ||||
| 14. Round | 15/10/2016 | Concordia Schönkirchen | - | TSB Flensburg | 2:5 | ||||
| 26. Round | 25/03/2017 | TSB Flensburg | - | Holstein Kiel II | 1:3 | ||||
| 27. Round | 02/04/2017 | SV Frisia 03 | - | TSB Flensburg | 2:2 | ||||
| 28. Round | 08/04/2017 | TSB Flensburg | - | Flensburg 08 | 5:2 | ||||
| 24. Round | 15/04/2017 | TSB Flensburg | - | NTSV Strand 08 | 1:2 |
Germany