| 26. Round | 22/02/2012 | FC Carl Zeiss Jena | - | SpVgg Unterhaching | 2:0 | ||||
| 28. Round | 03/03/2012 | FC Carl Zeiss Jena | - | Rot-Weiß Oberhausen | 0:0 | ||||
| 29. Round | 10/03/2012 | SV Sandhausen | - | FC Carl Zeiss Jena | 1:0 | ||||
| 30. Round | 17/03/2012 | SV Babelsberg 03 | - | FC Carl Zeiss Jena | 0:0 | ||||
| 25. Round | 20/03/2012 | Kickers Offenbach | - | FC Carl Zeiss Jena | 1:1 | ||||
| 32. Round | 01/04/2012 | VfB Stuttgart II | - | FC Carl Zeiss Jena | 3:0 | ||||
| 33. Round | 07/04/2012 | FC Carl Zeiss Jena | - | VfL Osnabrück | 2:0 |  |
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| 34. Round | 10/04/2012 | VfR Aalen | - | FC Carl Zeiss Jena | 4:1 | ||||
| 36. Round | 21/04/2012 | Arminia Bielefeld | - | FC Carl Zeiss Jena | 2:1 | ||||
| 37. Round | 28/04/2012 | FC Carl Zeiss Jena | - | SV Wehen Wiesbaden | 1:0 |
Germany