| 2. Round | 31/07/2015 | 1. FSV Mainz 05 II | - | 1. FC Magdeburg | 2:2 | ||||
| 4. Round | 21/08/2015 | Werder Bremen II | - | 1. FC Magdeburg | 1:1 | ||||
| 6. Round | 28/08/2015 | Fortuna Köln | - | 1. FC Magdeburg | 2:1 | ||||
| 7. Round | 15/09/2015 | 1. FC Magdeburg | - | VfL Osnabrück | 3:0 |  |
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| 9. Round | 18/09/2015 | 1. FC Magdeburg | - | VfR Aalen | 1:2 | |
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| 10. Round | 23/09/2015 | Hansa Rostock | - | 1. FC Magdeburg | 1:1 | ||||
| 12. Round | 02/10/2015 | Holstein Kiel | - | 1. FC Magdeburg | 0:0 | ||||
| 19. Round | 05/12/2015 | Würzburger Kickers | - | 1. FC Magdeburg | 1:1 | ||||
| 22. Round | 24/01/2016 | Hallescher FC | - | 1. FC Magdeburg | 1:2 | ||||
| 27. Round | 28/02/2016 | 1. FC Magdeburg | - | Stuttgarter Kickers | 2:1 | ||||
| 28. Round | 02/03/2016 | VfR Aalen | - | 1. FC Magdeburg | 0:0 | ||||
| 33. Round | 08/04/2016 | SV Wehen Wiesbaden | - | 1. FC Magdeburg | 0:0 | |
Germany