| 5. Round | 17/09/2006 | Chemnitzer FC [Youth] | - | Hansa Rostock [Youth] | 2:0 | ||||
| 6. Round | 23/09/2006 | Hansa Rostock [Youth] | - | Energie Cottbus [Youth] | 3:2 |  |
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| 14. Round | 17/02/2007 | Hansa Rostock [Youth] | - | SC Vier- u. Marschlande [Youth] | 4:1 | ||||
| 16. Round | 04/03/2007 | Hansa Rostock [Youth] | - | VfL Wolfsburg [Youth] | 0:2 | ||||
| 17. Round | 17/03/2007 | TeBe Berlin [Youth] | - | Hansa Rostock [Youth] | 0:4 | ||||
| 18. Round | 25/03/2007 | Hansa Rostock [Youth] | - | Chemnitzer FC [Youth] | 2:0 | |
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| 19. Round | 31/03/2007 | Energie Cottbus [Youth] | - | Hansa Rostock [Youth] | 0:2 | ||||
| 20. Round | 15/04/2007 | Hansa Rostock [Youth] | - | Hertha BSC [Youth] | 1:1 | ||||
| 23. Round | 01/05/2007 | Hamburger SV [Youth] | - | Hansa Rostock [Youth] | 2:2 | ||||
| 24. Round | 20/05/2007 | Hansa Rostock [Youth] | - | Rot-Weiß Erfurt [Youth] | 2:3 | |
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| 26. Round | 10/06/2007 | Holstein Kiel [Youth] | - | Hansa Rostock [Youth] | 2:3 | ||||
| 25. Round | 12/06/2007 | Hansa Rostock [Youth] | - | Tasmania Gropiusstadt [Youth] | 3:2 |
Germany