| 13. Round | 21/10/2000 | Rot-Weiß Erfurt | - | Jahn Regensburg | 2:4 | ||||
| 15. Round | 04/11/2000 | VfR Mannheim | - | Jahn Regensburg | 2:1 | ||||
| 16. Round | 11/11/2000 | Jahn Regensburg | - | VfB Stuttgart II | 0:3 | ||||
| 17. Round | 17/11/2000 | Kickers Offenbach | - | Jahn Regensburg | 0:1 |  |
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| 18. Round | 25/11/2000 | 1. FC Schweinfurt 05 | - | Jahn Regensburg | 3:1 | ||||
| 19. Round | 02/12/2000 | Jahn Regensburg | - | VfR Aalen | 1:2 | ||||
| 21. Round | 24/02/2001 | Jahn Regensburg | - | FC Carl Zeiss Jena | 2:2 | ||||
| 23. Round | 10/03/2001 | Jahn Regensburg | - | TSV 1860 München II | 1:1 | ||||
| 22. Round | 24/03/2001 | Sportfreunde Siegen | - | Jahn Regensburg | 2:0 | ||||
| 25. Round | 31/03/2001 | Jahn Regensburg | - | SV 07 Elversberg | 3:0 | ||||
| 27. Round | 12/04/2001 | Jahn Regensburg | - | Wacker Burghausen | 1:1 | ||||
| 28. Round | 20/04/2001 | Jahn Regensburg | - | SC Pfullendorf | 2:0 |
Germany