| 1. Round | 30/07/2006 | 1. FC Nürnberg II | - | SpVgg Greuther Fürth II | 1:4 | ||||
| 2. Round | 02/08/2006 | SpVgg Greuther Fürth II | - | FC Ismaning | 0:2 | ||||
| 3. Round | 05/08/2006 | SpVgg Bayreuth | - | SpVgg Greuther Fürth II | 1:3 |  |
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| 4. Round | 12/08/2006 | SpVgg Greuther Fürth II | - | VfL Frohnlach | 0:0 | ||||
| 5. Round | 15/08/2006 | SC Fürstenfeldbruck | - | SpVgg Greuther Fürth II | 1:2 | ||||
| 6. Round | 19/08/2006 | SpVgg Greuther Fürth II | - | Jahn Regensburg | 1:1 | ||||
| 7. Round | 26/08/2006 | Wacker Burghausen II | - | SpVgg Greuther Fürth II | 0:7 | ||||
| 8. Round | 30/08/2006 | SpVgg Greuther Fürth II | - | SpVgg Bayern Hof | 4:2 | |
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| 9. Round | 02/09/2006 | SpVgg Unterhaching II | - | SpVgg Greuther Fürth II | 0:0 | ||||
| 11. Round | 16/09/2006 | SpVgg Greuther Fürth II | - | SpVgg Weiden | 2:0 | ||||
| 14. Round | 19/09/2006 | 1. FC Eintracht Bamberg | - | SpVgg Greuther Fürth II | 1:3 | ||||
| 12. Round | 23/09/2006 | 1. FC Bad Kötzting | - | SpVgg Greuther Fürth II | 0:1 | ||||
| 13. Round | 30/09/2006 | SpVgg Greuther Fürth II | - | TSV Großbardorf | 4:0 |  |
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| 24. Round | 24/02/2007 | SpVgg Greuther Fürth II | - | SC Fürstenfeldbruck | 0:0 |
Germany