| 1. Round | 06/08/2006 | FC Schönberg 95 | - | BFC Dynamo | 4:2 | ||||
| 2. Round | 11/08/2006 | BFC Dynamo | - | TSG Neustrelitz | 0:0 |  |
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| 4. Round | 25/08/2006 | BFC Dynamo | - | LFC Berlin | 2:1 | ||||
| 5. Round | 20/09/2006 | TeBe Berlin | - | BFC Dynamo | 2:2 |  |
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| 6. Round | 24/09/2006 | BFC Dynamo | - | Torgelower SV Greif | 0:0 | ||||
| 10. Round | 28/10/2006 | BFC Dynamo | - | SV Yesilyurt | 1:1 | |
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| 11. Round | 04/11/2006 | BFC Preussen | - | BFC Dynamo | 1:1 | |
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| 12. Round | 11/11/2006 | BFC Dynamo | - | Germania Schöneiche | 1:1 | |
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| 13. Round | 18/11/2006 | BFC Dynamo | - | Ludwigsfelder FC | 2:3 | ||||
| 14. Round | 25/11/2006 | FV Motor Eberswalde | - | BFC Dynamo | 1:0 | ||||
| 16. Round | 09/12/2006 | BFC Dynamo | - | FC Schönberg 95 | 1:1 | |
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| 18. Round | 03/03/2007 | BFC Dynamo | - | BAK Ankaraspor 07 | 1:3 | ||||
| 21. Round | 24/03/2007 | Torgelower SV Greif | - | BFC Dynamo | 1:0 |
Poland