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| Tables | Home | Away | First round | Second round | » First half | Second half |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FC St. Pauli | 20 | 9 | 10 | 1 | 14:6 | 8 | 37 |
| 2 |
|
1. FC Union Berlin | 20 | 8 | 9 | 3 | 14:6 | 8 | 33 |
| 3 |
|
1. FC Köln | 20 | 7 | 11 | 2 | 15:3 | 12 | 32 |
| 4 |
|
Karlsruher SC | 20 | 6 | 13 | 1 | 14:5 | 9 | 31 |
| 5 |
|
SV Sandhausen | 20 | 5 | 14 | 1 | 10:4 | 6 | 29 |
| 6 |
|
FSV Frankfurt | 20 | 7 | 8 | 5 | 13:12 | 1 | 29 |
| 7 |
|
SpVgg Greuther Fürth | 20 | 7 | 7 | 6 | 15:12 | 3 | 28 |
| 8 |
|
1. FC Kaiserslautern | 20 | 5 | 12 | 3 | 14:9 | 5 | 27 |
| 9 |
|
SC Paderborn 07 | 20 | 5 | 11 | 4 | 11:13 | -2 | 26 |
| 10 |
|
VfL Bochum | 20 | 5 | 10 | 5 | 9:10 | -1 | 25 |
| 11 |
|
Energie Cottbus | 20 | 5 | 8 | 7 | 15:15 | 0 | 23 |
| 12 |
|
Fortuna Düsseldorf | 20 | 5 | 8 | 7 | 9:13 | -4 | 23 |
| 13 |
|
FC Ingolstadt 04 | 20 | 3 | 12 | 5 | 8:12 | -4 | 21 |
| 14 |
|
VfR Aalen | 20 | 3 | 11 | 6 | 9:14 | -5 | 20 |
| 15 |
|
TSV 1860 München | 20 | 1 | 15 | 4 | 6:10 | -4 | 18 |
| 16 |
|
Dynamo Dresden | 20 | 2 | 11 | 7 | 6:14 | -8 | 17 |
| 17 |
|
Erzgebirge Aue | 20 | 3 | 6 | 11 | 8:20 | -12 | 15 |
| 18 |
|
Arminia Bielefeld | 20 | 1 | 10 | 9 | 6:18 | -12 | 13 |
| Promotion | |
| Playoffs | |
| Playoffs | |
| Relegation |
