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| Tables | Home | Away | First round | Second round | » First half | Second half |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FC St. Pauli | 23 | 9 | 12 | 2 | 15:8 | 7 | 39 |
| 2 |
|
1. FC Union Berlin | 23 | 9 | 10 | 4 | 15:7 | 8 | 37 |
| 3 |
|
1. FC Köln | 23 | 8 | 12 | 3 | 16:4 | 12 | 36 |
| 4 |
|
Karlsruher SC | 23 | 7 | 15 | 1 | 15:5 | 10 | 36 |
| 5 |
|
SV Sandhausen | 23 | 5 | 17 | 1 | 10:4 | 6 | 32 |
| 6 |
|
VfL Bochum | 23 | 7 | 11 | 5 | 11:10 | 1 | 32 |
| 7 |
|
FSV Frankfurt | 23 | 8 | 8 | 7 | 15:15 | 0 | 32 |
| 8 |
|
SC Paderborn 07 | 23 | 7 | 11 | 5 | 14:14 | 0 | 32 |
| 9 |
|
Fortuna Düsseldorf | 23 | 7 | 9 | 7 | 11:13 | -2 | 30 |
| 10 |
|
SpVgg Greuther Fürth | 23 | 7 | 7 | 9 | 16:16 | 0 | 28 |
| 11 |
|
1. FC Kaiserslautern | 23 | 5 | 12 | 6 | 14:12 | 2 | 27 |
| 12 |
|
Energie Cottbus | 23 | 6 | 9 | 8 | 17:19 | -2 | 27 |
| 13 |
|
FC Ingolstadt 04 | 23 | 4 | 14 | 5 | 10:13 | -3 | 26 |
| 14 |
|
VfR Aalen | 23 | 4 | 13 | 6 | 11:15 | -4 | 25 |
| 15 |
|
Erzgebirge Aue | 23 | 6 | 6 | 11 | 13:20 | -7 | 24 |
| 16 |
|
Dynamo Dresden | 23 | 3 | 13 | 7 | 9:16 | -7 | 22 |
| 17 |
|
TSV 1860 München | 23 | 1 | 16 | 6 | 6:13 | -7 | 19 |
| 18 |
|
Arminia Bielefeld | 23 | 1 | 11 | 11 | 6:20 | -14 | 14 |
| Promotion | |
| Playoffs | |
| Playoffs | |
| Relegation |
