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| Tables | Home | Away | First round | Second round | First half | » Second half |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FC St. Pauli | 12 | 7 | 1 | 4 | 12:8 | 4 | 22 |
| 2 |
|
1. FC Köln | 12 | 7 | 0 | 5 | 14:11 | 3 | 21 |
| 3 |
|
Holstein Kiel | 12 | 6 | 3 | 3 | 13:12 | 1 | 21 |
| 4 |
|
Hamburger SV | 12 | 6 | 3 | 3 | 9:8 | 1 | 21 |
| 5 |
|
SpVgg Greuther Fürth | 12 | 5 | 5 | 2 | 17:9 | 8 | 20 |
| 6 |
|
1. FC Heidenheim 1846 | 12 | 4 | 6 | 2 | 10:6 | 4 | 18 |
| 7 |
|
1. FC Union Berlin | 12 | 4 | 6 | 2 | 9:6 | 3 | 18 |
| 8 |
|
Jahn Regensburg | 12 | 4 | 5 | 3 | 9:7 | 2 | 17 |
| 9 |
|
Dynamo Dresden | 12 | 4 | 5 | 3 | 7:5 | 2 | 17 |
| 10 |
|
SV Darmstadt 98 | 12 | 5 | 2 | 5 | 10:11 | -1 | 17 |
| 11 |
|
SC Paderborn 07 | 12 | 4 | 4 | 4 | 14:13 | 1 | 16 |
| 12 |
|
1. FC Magdeburg | 12 | 4 | 3 | 5 | 11:11 | 0 | 15 |
| 13 |
|
Erzgebirge Aue | 12 | 4 | 3 | 5 | 7:7 | 0 | 15 |
| 14 |
|
VfL Bochum | 12 | 3 | 4 | 5 | 10:11 | -1 | 13 |
| 15 |
|
MSV Duisburg | 12 | 3 | 3 | 6 | 7:14 | -7 | 12 |
| 16 |
|
Arminia Bielefeld | 12 | 3 | 3 | 6 | 6:13 | -7 | 12 |
| 17 |
|
FC Ingolstadt 04 | 12 | 1 | 6 | 5 | 9:17 | -8 | 9 |
| 18 |
|
SV Sandhausen | 12 | 2 | 2 | 8 | 8:13 | -5 | 8 |
| Promotion | |
| Playoffs | |
| Playoffs | |
| Relegation |
