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| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Erzgebirge Aue | 16 | 12 | 3 | 1 | 30:10 | 20 | 39 |
| 2 |
|
VfL Osnabrück | 16 | 12 | 3 | 1 | 29:11 | 18 | 39 |
| 3 |
|
Eintracht Braunschweig | 15 | 10 | 2 | 3 | 26:12 | 14 | 32 |
| 4 |
|
1. FC Heidenheim 1846 | 15 | 9 | 3 | 3 | 30:17 | 13 | 30 |
| 5 |
|
FC Ingolstadt 04 | 15 | 8 | 5 | 2 | 36:13 | 23 | 29 |
| 6 |
|
FC Carl Zeiss Jena | 14 | 8 | 3 | 3 | 22:14 | 8 | 27 |
| 7 |
|
SV Sandhausen | 15 | 7 | 5 | 3 | 26:19 | 7 | 26 |
| 8 |
|
Dynamo Dresden | 14 | 8 | 2 | 4 | 23:17 | 6 | 26 |
| 9 |
|
Wacker Burghausen | 15 | 8 | 2 | 5 | 25:22 | 3 | 26 |
| 10 |
|
Kickers Offenbach | 15 | 7 | 4 | 4 | 27:13 | 14 | 25 |
| 11 |
|
Holstein Kiel | 15 | 6 | 7 | 2 | 18:10 | 8 | 25 |
| 12 |
|
Bayern München II | 15 | 6 | 7 | 2 | 21:18 | 3 | 25 |
| 13 |
|
Rot-Weiß Erfurt | 16 | 7 | 4 | 5 | 18:15 | 3 | 25 |
| 14 |
|
Jahn Regensburg | 15 | 6 | 6 | 3 | 14:12 | 2 | 24 |
| 15 |
|
SV Wehen Wiesbaden | 15 | 6 | 3 | 6 | 23:21 | 2 | 21 |
| 16 |
|
Werder Bremen II | 15 | 6 | 2 | 7 | 25:18 | 7 | 20 |
| 17 |
|
SpVgg Unterhaching | 14 | 5 | 5 | 4 | 19:16 | 3 | 20 |
| 18 |
|
Borussia Dortmund II | 15 | 5 | 4 | 6 | 13:14 | -1 | 19 |
| 19 |
|
VfB Stuttgart II | 15 | 5 | 2 | 8 | 23:24 | -1 | 17 |
| 20 |
|
Wuppertaler SV | 15 | 4 | 3 | 8 | 17:30 | -13 | 15 |
| Promotion | |
| Playoffs | |
| Relegation |
