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| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FC Carl Zeiss Jena | 18 | 7 | 6 | 5 | 25:23 | 2 | 27 |
| 2 |
|
FC Ingolstadt 04 | 18 | 8 | 2 | 8 | 23:25 | -2 | 26 |
| 3 |
|
1. FC Heidenheim 1846 | 18 | 7 | 4 | 7 | 29:30 | -1 | 25 |
| 4 |
|
VfB Stuttgart II | 18 | 7 | 2 | 9 | 21:22 | -1 | 23 |
| 5 |
|
Kickers Offenbach | 18 | 5 | 7 | 6 | 19:19 | 0 | 22 |
| 6 |
|
Rot-Weiß Erfurt | 18 | 6 | 4 | 8 | 20:24 | -4 | 22 |
| 7 |
|
Wuppertaler SV | 18 | 6 | 3 | 9 | 18:22 | -4 | 21 |
| 8 |
|
Eintracht Braunschweig | 18 | 4 | 8 | 6 | 18:20 | -2 | 20 |
| 9 |
|
SpVgg Unterhaching | 18 | 5 | 5 | 8 | 24:28 | -4 | 20 |
| 10 |
|
Erzgebirge Aue | 18 | 5 | 5 | 8 | 18:27 | -9 | 20 |
| 11 |
|
Werder Bremen II | 18 | 5 | 5 | 8 | 17:29 | -12 | 20 |
| 12 |
|
VfL Osnabrück | 18 | 4 | 6 | 8 | 15:23 | -8 | 18 |
| 13 |
|
Jahn Regensburg | 18 | 4 | 5 | 9 | 23:27 | -4 | 17 |
| 14 |
|
SV Wehen Wiesbaden | 18 | 4 | 5 | 9 | 18:33 | -15 | 17 |
| 15 |
|
Bayern München II | 18 | 5 | 2 | 11 | 25:42 | -17 | 17 |
| 16 |
|
Dynamo Dresden | 18 | 3 | 6 | 9 | 10:19 | -9 | 15 |
| 17 |
|
Borussia Dortmund II | 18 | 4 | 2 | 12 | 21:34 | -13 | 14 |
| 18 |
|
SV Sandhausen | 18 | 3 | 5 | 10 | 21:38 | -17 | 14 |
| 19 |
|
Wacker Burghausen | 18 | 3 | 4 | 11 | 11:36 | -25 | 13 |
| 20 |
|
Holstein Kiel | 18 | 2 | 2 | 14 | 16:40 | -24 | 8 |
| Promotion | |
| Playoffs | |
| Relegation |
