| 1. Round | 05/08/2016 | Union Sandersdorf | - | FSV Barleben | 1:2 | ||||
| 3. Round | 28/08/2016 | FC Einheit Rudolstadt | - | FSV Barleben | 1:0 |  |
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| 4. Round | 10/09/2016 | FSV Barleben | - | Askania Bernburg | 2:0 | ||||
| 5. Round | 17/09/2016 | BSG Chemie Leipzig | - | FSV Barleben | 4:1 | ||||
| 6. Round | 24/09/2016 | FSV Barleben | - | SV Merseburg 99 | 2:2 | ||||
| 7. Round | 02/10/2016 | VFC Plauen | - | FSV Barleben | 2:3 | ||||
| 8. Round | 16/10/2016 | FSV Barleben | - | Germania Halberstadt | 1:4 | ||||
| 9. Round | 22/10/2016 | SV SCHOTT Jena | - | FSV Barleben | 0:0 | ||||
| 10. Round | 29/10/2016 | FSV Barleben | - | SSV Markranstädt | 1:0 | ||||
| 11. Round | 05/11/2016 | Bischofswerdaer FV | - | FSV Barleben | 2:1 | ||||
| 12. Round | 19/11/2016 | FSV Barleben | - | VfL Halle 96 | 3:2 | ||||
| 13. Round | 27/11/2016 | Inter Leipzig | - | FSV Barleben | 3:1 | ||||
| 15. Round | 10/12/2016 | FSV Barleben | - | BSG Wismut Gera | 1:3 |
Germany