| 1. Round | 07/08/2016 | FC Einheit Rudolstadt | - | VfL Halle 96 | 3:0 | ||||
| 2. Round | 13/08/2016 | VfL Halle 96 | - | Askania Bernburg | 0:3 | ||||
| 3. Round | 26/08/2016 | BSG Chemie Leipzig | - | VfL Halle 96 | 2:0 |  |
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| 4. Round | 09/09/2016 | VfL Halle 96 | - | SV Merseburg 99 | 0:1 | ||||
| 5. Round | 18/09/2016 | VFC Plauen | - | VfL Halle 96 | 4:2 | ||||
| 6. Round | 25/09/2016 | VfL Halle 96 | - | Germania Halberstadt | 0:2 | ||||
| 8. Round | 15/10/2016 | VfL Halle 96 | - | SSV Markranstädt | 5:2 |  |
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| 9. Round | 22/10/2016 | Bischofswerdaer FV | - | VfL Halle 96 | 4:0 | ||||
| 10. Round | 29/10/2016 | VfL Halle 96 | - | Brandenburger SC Süd | 1:4 | |
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| 11. Round | 06/11/2016 | VfL Halle 96 | - | Inter Leipzig | 1:1 | ||||
| 12. Round | 19/11/2016 | FSV Barleben | - | VfL Halle 96 | 3:2 | |
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| 17. Round | 24/02/2017 | Askania Bernburg | - | VfL Halle 96 | 1:0 | ||||
| 19. Round | 12/03/2017 | SV Merseburg 99 | - | VfL Halle 96 | 1:0 | ||||
| 21. Round | 31/03/2017 | Germania Halberstadt | - | VfL Halle 96 | 5:0 | |
Germany